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mtDNA single-cell paper

In CRC, mtDNA heteroplasmy mainly arises from differences among cells, but in some cases, the ancestral tumor cell can host…

Understanding SARS-CoV-2 transmission

Together with colleagues at a local hospital, here we show that is not easy to figure out with just genomics…

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« Feb

David PosadaFollow

A computational evolutionary biologist lately interested in cancer evolution.

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Ewa Szczurek @ewa_szczurek·

21 Apr

Great opportunity for a postdoc position in my lab. Both involve research on machine learning and cancer. Please RT! https://www.mimuw.edu.pl/~szczurek/positions.html

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Trevor Graham @trevoragraham·

21 Mar

This method is important because it allows phylogeny reconstruction & mutation rate estimation from copy number data without b-alleles, & handles time explicitly. Use it to make more of cheap and high throughput low-coverage sequencing data. Fab stuff from @lubingxin & @cssb_lab https://twitter.com/cssb_lab/status/1505826987390246912

CSSB Lab@cssb_lab

New work from @lubingxin on temporal phylogeny inference from tumour shallow WGS samples. With Ziheng Yang, @trevoragraham, @yosoykit. Great to see this out there! https://twitter.com/biorxivpreprint/status/1505737538572636161

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David Posada @dposada_·

8 Mar

It look a long time, but it is finally out:

https://onlinelibrary.wiley.com/doi/10.1111/ecog.05808

with @andres_baselga, @AlfriedVogler , et al

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David Posada @dposada_·

7 Mar

New preprint on single-cell phylogenetics of CRC relapse, with @CD68PHD2 @JMFAlves et al.: https://www.medrxiv.org/content/10.1101/2022.03.03.22271700v1

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Trevor Graham @trevoragraham·

22 Feb

Applications open for our @wellcometrust sponsored practical course on applying methods from evolution & ecology to cancer. Course tutors are the people who wrote the software. Especially useful for early career researchers.

Faculty: @amy_boddy @cmaley @trevoragraham & @yosoykit https://twitter.com/eventsWCS/status/1496097558833377280

Wellcome Connecting Science Courses & Conferences@eventsWCS

Interested in how to apply #evolution & #ecology tools to your cancer research?#EBECancer22

Join expert instructors to bridge the gap between the understanding of #cancer cells & the processes that give rise to them & their evolution

📩 Apply by 12 April:https://bit.ly/3JNVBe2

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CINBIO

University of Vigo

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