Together with colleagues at a local hospital, here we show that is not easy to figure out with just genomics who infected whom with SARS-CoV-2
Limited Genomic Reconstruction of SARS-CoV-2 Transmission History Within Local Epidemiological
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New paper: Detecting changes in the evolutionary rate of cell lineages
Check our new paper on changes in the evolutionary rate among somatic lineages! https://cell.com/cell-genomics/fulltext/S2666-979X(23)00177-5… Here, we developed a novel phylogenetic…
Continue ReadingSIEVE: joint inference of single‑nucleotide
variants and cell phylogeny from single‑cell
DNA sequencing data
A very nice collaboration with the Szczurek and Beerenwinkel labs under the Computational ONcology TRaining Alliance Innovative Training (CONTRA) Network.…
Continue ReadingGenomic characterization of circulating tumor cells
Today out in Genomics! We found substantial differences in the mutational loads of CTC pools obtained using different CTC-capture methods.CTC…
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